BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012F09LP1|AL426399
(818 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1761 1611 0.0
>3x_Contig1761
Length = 23186
Score = 1611 bits (812), Expect = 0.0
Identities = 816/818 (99%)
Strand = Plus / Minus
Query: 1 gatccaataccttcccggtcaacaaaaccaaatgacctcaaggatgcctttgacatgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22281 gatccaataccttcccggtcaacaaaaccaaatgacctcaaggatgcctttgacatgaga 22222
Query: 61 gatgggatggaaagagaccagggaaaaagtcttcgtgctgatggacggaaacataattgc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22221 catgggatggaaagagaccagggaaaaagtcttcgtgctgatggacggaaacataattgc 22162
Query: 121 ttgccgatggacatacggttttaatgctgtacttttaaaattataatagcttttaaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22161 ttgccgatggacatacggttttaatgctgtacttttaaaattataatagcttttaaattt 22102
Query: 181 gtatacttagtgtttctatgttacacatgcgtctttccctgcttttacttcgatagattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22101 gtatacttagtgtttctatgttacacatgcgtctttccctgcttttacttcgatagattg 22042
Query: 241 ctcgattcatttcgtgttagcttcaatttcccggtgtgttaagaggtagttgagataata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22041 ctcgattcatttcgtgttagcttcaatttcccggtgtgttaagaggtagttgagataata 21982
Query: 301 ggtatttaatggggttctgttaagattcaacatcatggactggtggcttgttggcagcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21981 ggtatttaatggggttctgttaagattcaacatcatggactggtggcttgttggcagcat 21922
Query: 361 tacgatttccaccacggaagccaccgcggttaccgccacggttacctctatatccaccac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21921 tacgatttccaccacggaagccaccgcggttaccgccacggttacctctatatccaccac 21862
Query: 421 gacctctgaagccgccacgaccattgtttcttggtctggcttgaccgaragtatccaagt 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 21861 gacctctgaagccgccacgaccattgtttcttggtctggcttgaccgaaagtatccaagt 21802
Query: 481 tgacctggcgttcctcttcccatttggcagaagacgagttttctacggcggaacttgaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21801 tgacctggcgttcctcttcccatttggcagaagacgagttttctacggcggaacttgaaa 21742
Query: 541 tggaatcaaagaatgaggattttttatcgtagaaaatctcatctgtcttggaggtttgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21741 tggaatcaaagaatgaggattttttatcgtagaaaatctcatctgtcttggaggtttgct 21682
Query: 601 tctcttgttctatatctgattctctgggcttttcagcattctggaatttggcgttgttac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21681 tctcttgttctatatctgattctctgggcttttcagcattctggaatttggcgttgttac 21622
Query: 661 tttcgaaatcaaattcagaatctggaacagcagaaggagccaccgcagccacaggagcag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21621 tttcgaaatcaaattcagaatctggaacagcagaaggagccaccgcagccacaggagcag 21562
Query: 721 caggagccgcagacttctgctgttgctggttaggaactttcttttcggtaacaggctgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21561 caggagccgcagacttctgctgttgctggttaggaactttcttttcggtaacaggctgtt 21502
Query: 781 ggcgggtctgctgtctttgctgctgctgtttttgctgg 818
||||||||||||||||||||||||||||||||||||||
Sbjct: 21501 ggcgggtctgctgtctttgctgctgctgtttttgctgg 21464
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5800
Number of Sequences: 1807
Number of extensions: 5800
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 818
length of database: 10,358,551
effective HSP length: 16
effective length of query: 802
effective length of database: 10,329,639
effective search space: 8284370478
effective search space used: 8284370478
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)